And this is true. A full standalone (Haltech, AEM EMS, MegaSquirt, etc.) IS the best solution.
However, in the same breath I will say that in this case (from what I understand) we only have to compensate for a few psi variance off of an existing, working, and known-good fuel & timing map. I think a piggyback here is a good choice for that reason and the sake of a reasonable budget for the desired result.
IF, however, there were to be a change in supercharger, change in compression, change in heads, change in cams, or any other significant alteration to the operation and efficiency of the motor beyond what the ECU & chip were designed for then I would say piggyback fuel management would not be sufficient. At that point a full standalone would be my recommendation.